Microbiome scenario analyses
Explore the 11 published differential analyses from the APOLLO microbiome models (Cell Systems 2025). Each scenario compares groups of models and tests features — subsystems, microbes, reactions, reaction presence, and secretion fluxes — for group differences (ANOVA / t-test, FDR-corrected). These are population-level model comparisons, not clinical findings.
Click a row to see per-group means. "Highest mean" flags the group with the largest mean — for multi-group scenarios it is not a simple up/down direction. Reaction features link to their VMH page. "CSV (page)" exports the rows currently shown.
Source: Supplementary Table S13 of Heinken A, Hulshof TO, Nap B, … Thiele I. A genome-scale metabolic reconstruction resource of 247,092 diverse human microbes… Cell Systems 2025;16(2):101196. PMID: 39947184.